Pluk-based fluorescent microscopy image analysis

  1. Stéphane Gasman, Yannis Kalaidzidis and Marino Zerial., RhoD regulates endosome dynamics via Diaphanous-Related Formin and Src Tyrosine Kinase. Nature Cell Biology, 2003.
  2. Jochen Rink, Yannis Kalaidzidis, Marino Zerial, Rab Conversion as a Mechanism of Progression from Early to Late Endosomes, Cell. 2005 Sep 9;122(5):735-49.
  3. Helenius J, Brouhard G, Kalaidzidis Y, Diez S, Howard J., The depolymerizing kinesin MCAK uses lattice diffusion to rapidly target microtubule ends, Nature. 2006 May 4;441(7089):115-9.
  4. Anna Kicheva, Periklis Pantazis, Tobias Bollenbach, Yannis Kalaidzidis, Thomas Bittig, Frank Jülicher and Marcos González-Gaitán, Kinetics of Morphogen Gradient Formation, Science 2007, v. 315. n. 5811, pp. 521 – 525
  5. Del Conte-Zerial, P., Brusch, L., Rink, J.C., Collinet, C., Kalaidzidis, Y.L., Zerial, M., Deutsch, A., Membrane Identity and GTPase Cascades Regulated by Toggle and Cut-Out Switches, Molecular Systems Biology, v4. pp.1-9, (2008)
  6. Poznyakovskiy, A.A., Zahnert, T., Kalaidzidis, Y.L., Schmidt, R., Fischer, B., Baumgart, J., Yarin, Y.M., The Creation of Geometric Three-Dimensional Models of the Inner Ear Based on Micro Computer Tomography Data, Hearing Research, v.243, pp.95­104 (2008)
  7. Demmel, L., Gravert, M., Ercan, E., Habermann, B., Mueller-Reichert, T., Kukhtina, V., Haucke, V., Baust, T., Sohrmann, M., Kalaidzidis, Y.L., Klose, C., Beck, M., Peter, M., Walch-Solimena, C., The Clathrin Adaptor Gga2p is a Phosphatidylinositol 4-Phosphate Effector at the Golgi Exit, Molecular Biology of the Cell, v.19, pp.1991­2002 (2008)
  8. Grimard, V., Massier, J., Richter, D., Schwudke, D., Kalaidzidis, Y.L., Fava, E., Hermetter, A., Thiele, C., siRNA Screening Reveals JNK2 as an Evolutionary Conserved Regulator of Triglyceride Homeostasis, Journal of Lipid Research, v.49, pp.2427-2440 (2008)
  9. Peter Bieling, Ivo A Telley, Jacob Piehler & Thomas Surrey, Processive kinesins require loose mechanical coupling for efficient collective motility, EMBO reports v.9, 1121 – 1127 (2008)
  10. Trajkovski, M, Mziaut, H, Schubert, S, Kalaidzidis, Y, Altkruerger, A, Solimena, M, Regulation of Insulin Granule Turnover in Pancreatic beta-Cells by Cleaved ICA512, JBC v.283 (48) pp.33719-33729 (2008)
  11. Ohya, T., Miaczynska, M., Coskun, U., Lommer, B., Runge, A., Drechsel, D., Kalaidzidis, Y.L., Zerial, M., Reconstitution of Rab and Snare-Dependent Membrane Fusion by Synthetic Endosomes, Nature, v.459(7250), pp.1091-1100 (2009)
  12. Ivo A. Telley, Peter Bieling, Thomas Surrey, Obstacles on the Microtubule Reduce the Processivity of Kinesin-1 in a Minimal In Vitro System and in Cell Extract, Biophysical Journal Volume 96 April 2009 3341–3353
  13. Yonathan Lissanu Deribe, Philipp Wild, Akhila Chandrashaker, Jasna Curak, Mirko H. H. Schmidt, Yannis Kalaidzidis, Natasa Milutinovic, Irina Kratchmarova, Lukas Buerkle, Michael J. Fetchko, Philipp Schmidt, Saranya Kittanakom, Kevin R. Brown, Igor Jurisica, Blagoy Blagoev, Marino Zerial, Igor Stagljar*, and Ivan Dikic, Regulation of Epidermal Growth Factor Receptor Trafficking by Lysine Deacetylase HDAC6, Sci. Signal., v. 2(102) p. ra84 (2009)
  14. Collinet, C., Stoeter, M., Bradshaw, C.R., Samusik, N., Rink, J.C., Kenski, D., Habermann, B., Buchholz, F., Henschel, R., Mueller, M.S., Nagel, W.E., Fava, E., Kalaidzidis, Y., Zerial, M., Systems Survey of Endocytosis by Multiparametric Image Analysis, Nature, v.464, pp.243-250 (2010)
  15. Christian Hentrich and Thomas Surrey, Microtubule organization by the antagonistic mitotic motors kinesin-5 and kinesin-14, JCB vol. 189( 3) pp.465-480 (2010)
  16. Peter Bieling, Ivo A. Telley, Thomas Surrey, A Minimal Midzone Protein Module Controls Formation and Length of Antiparallel Microtubule Overlaps, Cell, v.142(3), pp. 420–432 (2010)
  17. Urbanska, A., Sadowski, L., Kalaidzidis, Y., Miaczynska, M., Biochemical Characterization of APPL Endosomes: the Role of Annexin A2 in Appl Membrane Recruitment, Traffic, v.12, pp.1227-1241 (2011)
  18. Pilecka, I., Sadowski, L., Kalaidzidis, Y., Miaczynska, M., Recruitment of APPL1 to Ubiquitin-Rich Aggresomes in Response to Proteasomal Impairment, Experimental Cell Research, v.317, pp.1093-1107 (2011)
  19. Johanna Roostalu, Christian Hentrich, Peter Bieling, Ivo A Telley, Elmar Schiebel, Thomas Surrey, Directional switching of the kinesin Cin8 through motor coupling, Science v.332(6025), pp94-99 (2011)
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